Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11778035 chr8:4185991 A/G OR6C3 chr12:55725485-55726420:+ 0.66 8.07 9.71E-11 Box Plot
ACC rs117787283 chr18:37017037 G/A PRHOXNB chr13:28552243-28562774:- 0.6 7.92 1.68E-10 Box Plot
ACC rs117798087 chr18:37099973 G/A PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs117827968 chr7:17267495 A/G TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs117872617 chr11:8588613 G/T PRHOXNB chr13:28552243-28562774:- 0.6 7.82 2.49E-10 Box Plot
ACC rs117878804 chr7:94510993 T/C OR5V1 chr6:29323007-29399744:- 0.64 9.22 1.62E-12 Box Plot
ACC rs117940142 chr17:32527035 A/C TFDP3 chrX:132350697-132352376:- 1.01 8.82 6.6E-12 Box Plot
ACC rs118191085 chr18:37091928 G/A PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs11858229 chr15:86111252 G/A PRHOXNB chr13:28552243-28562774:- 0.6 7.51 7.49E-10 Box Plot
ACC rs11896308 chr2:218822715 T/C AADACL4 chr1:12704566-12727097:+ 0.73 8.4 2.99E-11 Box Plot
ACC rs11949953 chr5:71544320 C/T GDPD5 chr11:75145685-75236948:- -0.77 -7.75 3.21E-10 Box Plot
ACC rs11965530 chr6:52129863 C/A OR6C3 chr12:55725485-55726420:+ 0.9 7.64 4.7E-10 Box Plot
ACC rs11968115 chr6:52129789 T/C OR6C3 chr12:55725485-55726420:+ 0.9 7.64 4.7E-10 Box Plot
ACC rs11986143 chr8:112819616 A/G KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs11986143 chr8:112819616 A/G KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot